OILS / deps / source.medo / R-libs / WEDGE View on Github | oilshell.org

66 lines, 52 significant
1# Wedge definition for R libraries
2#
3# Loaded by deps/wedge.sh.
4
5set -o nounset
6set -o pipefail
7set -o errexit
8
9# sourced
10WEDGE_NAME='R-libs'
11WEDGE_VERSION='2023-04-18'
12
13# We are installing into /home/wedge-makeer, and we want to use it from
14# /home/andy or /home/uke
15#
16# WEDGE_IS_ABSOLUTE=1
17
18# R hits the network
19WEDGE_LEAKY_BUILD=1
20
21# Notes: dplyr 1.0.3 as of January 2021 made these fail on Xenial.
22# I did an R 4.0 installation. See build/py.sh install-new-R
23#
24# February 2023: compile errors with dplyr and Ubuntu 18.04, which has R 3.4.4.
25# tidyverse has minimum R of 3.6.
26# I need to install a new R again.
27
28wedge-make() {
29 echo 'No make step'
30
31}
32
33wedge-install() {
34 local build_dir=$1
35 local install_dir=$2
36
37 # 2024-02 - weird fix, I had to add "rlang" on Debian Bookworm. Otherwise
38 # the smoke test for dplyr/tidyr would fail.
39
40 echo
41 echo '*** INFO: Rscript --version ***'
42 echo
43 Rscript --version
44 echo
45
46 # Gah! This "devtools" has a shitload of deps itself ... sad
47 # #
48 # https://support.posit.co/hc/en-us/articles/219949047-Installing-older-versions-of-packages
49 if false; then
50 INSTALL_DEST=$install_dir Rscript -e \
51 'install.packages(c("devtools"), lib=Sys.getenv("INSTALL_DEST"), repos="https://cloud.r-project.org")'
52 fi
53
54 # Also consider adding ggplot.
55 if true; then
56 INSTALL_DEST=$install_dir Rscript -e \
57 'install.packages(c("rlang", "dplyr", "tidyr", "stringr", "RUnit"), lib=Sys.getenv("INSTALL_DEST"), repos="https://cloud.r-project.org")'
58 fi
59}
60
61wedge-smoke-test() {
62 local install_dir=$1
63
64 R_LIBS_USER=$install_dir Rscript -e \
65 'library(rlang); library(dplyr); library(tidyr); library(stringr); library("RUnit"); print("OK")'
66}