>>> py3-complexheatmap: Building community/py3-complexheatmap 1.7.6-r0 (using abuild 3.15.0-r0) started Sun, 12 Oct 2025 15:47:04 +0000 >>> py3-complexheatmap: Validating /home/udu/aports/community/py3-complexheatmap/APKBUILD... >>> py3-complexheatmap: Analyzing dependencies... >>> py3-complexheatmap: Installing for build: build-base python3 py3-matplotlib py3-numpy py3-pandas py3-seaborn py3-gpep517 py3-setuptools_scm py3-wheel WARNING: opening /home/udu/packages//community: No such file or directory WARNING: opening /home/udu/packages//main: No such file or directory fetch http://dl-cdn.alpinelinux.org/alpine/v3.22/main/x86_64/APKINDEX.tar.gz fetch http://dl-cdn.alpinelinux.org/alpine/v3.22/community/x86_64/APKINDEX.tar.gz (1/86) Installing libquadmath (14.2.0-r6) (2/86) Installing libgfortran (14.2.0-r6) (3/86) Installing openblas (0.3.28-r0) (4/86) Installing py3-numpy (2.2.4-r1) (5/86) Installing py3-numpy-tests (2.2.4-r1) (6/86) Installing py3-numpy-pyc (2.2.4-r1) (7/86) Installing py3-contourpy (1.3.1-r0) (8/86) Installing py3-contourpy-pyc (1.3.1-r0) (9/86) Installing py3-cycler (0.12.1-r1) (10/86) Installing py3-cycler-pyc (0.12.1-r1) (11/86) Installing py3-six (1.17.0-r0) (12/86) Installing py3-six-pyc (1.17.0-r0) (13/86) Installing py3-dateutil (2.9.0-r1) (14/86) Installing py3-dateutil-pyc (2.9.0-r1) (15/86) Installing py3-fonttools (4.58.0-r0) (16/86) Installing py3-fonttools-pyc (4.58.0-r0) (17/86) Installing py3-kiwisolver (1.4.6-r0) (18/86) Installing py3-kiwisolver-pyc (1.4.6-r0) (19/86) Installing py3-matplotlib-fonts (3.9.3-r0) (20/86) Installing py3-matplotlib-data (3.9.3-r0) (21/86) Installing py3-parsing (3.2.3-r0) (22/86) Installing py3-parsing-pyc (3.2.3-r0) (23/86) Installing py3-packaging (25.0-r0) (24/86) Installing py3-packaging-pyc (25.0-r0) (25/86) Installing libpng (1.6.47-r0) (26/86) Installing freetype (2.13.3-r0) (27/86) Installing libimagequant (4.2.2-r0) (28/86) Installing libjpeg-turbo (3.1.0-r0) (29/86) Installing lcms2 (2.16-r0) (30/86) Installing openjpeg (2.5.3-r0) (31/86) Installing libsharpyuv (1.5.0-r0) (32/86) Installing libwebp (1.5.0-r0) (33/86) Installing tiff (4.7.1-r0) (34/86) Installing libwebpdemux (1.5.0-r0) (35/86) Installing libwebpmux (1.5.0-r0) (36/86) Installing libxau (1.0.12-r0) (37/86) Installing libmd (1.1.0-r0) (38/86) Installing libbsd (0.12.2-r0) (39/86) Installing libxdmcp (1.1.5-r1) (40/86) Installing libxcb (1.17.0-r0) (41/86) Installing py3-pillow (11.2.1-r0) (42/86) Installing py3-pillow-pyc (11.2.1-r0) (43/86) Installing qhull (2020.2-r3) (44/86) Installing py3-matplotlib (3.9.3-r0) (45/86) Installing py3-matplotlib-pyc (3.9.3-r0) (46/86) Installing py3-tz (2025.2-r0) (47/86) Installing py3-tz-pyc (2025.2-r0) (48/86) Installing py3-attrs (25.3.0-r0) (49/86) Installing py3-attrs-pyc (25.3.0-r0) (50/86) Installing py3-tzdata (2025.2-r0) (51/86) Installing py3-tzdata-pyc (2025.2-r0) (52/86) Installing py3-pandas (2.2.3-r0) (53/86) Installing py3-pandas-pyc (2.2.3-r0) (54/86) Installing py3-platformdirs (4.3.8-r0) (55/86) Installing py3-platformdirs-pyc (4.3.8-r0) (56/86) Installing py3-certifi (2025.4.26-r0) (57/86) Installing py3-certifi-pyc (2025.4.26-r0) (58/86) Installing py3-charset-normalizer (3.4.2-r0) (59/86) Installing py3-charset-normalizer-pyc (3.4.2-r0) (60/86) Installing py3-idna (3.10-r0) (61/86) Installing py3-idna-pyc (3.10-r0) (62/86) Installing py3-urllib3 (1.26.20-r0) (63/86) Installing py3-urllib3-pyc (1.26.20-r0) (64/86) Installing py3-requests (2.32.5-r0) (65/86) Installing py3-requests-pyc (2.32.5-r0) (66/86) Installing py3-pooch (1.8.2-r1) (67/86) Installing py3-pooch-pyc (1.8.2-r1) (68/86) Installing py3-scipy (1.13.1-r1) (69/86) Installing py3-scipy-pyc (1.13.1-r1) (70/86) Installing py3-patsy (1.0.1-r0) (71/86) Installing py3-patsy-pyc (1.0.1-r0) (72/86) Installing py3-statsmodels (0.14.4-r0) (73/86) Installing py3-statsmodels-pyc (0.14.4-r0) (74/86) Installing py3-seaborn (0.13.2-r2) (75/86) Installing py3-seaborn-pyc (0.13.2-r2) (76/86) Installing py3-installer (0.7.0-r2) (77/86) Installing py3-installer-pyc (0.7.0-r2) (78/86) Installing py3-gpep517 (19-r0) (79/86) Installing py3-gpep517-pyc (19-r0) (80/86) Installing py3-setuptools (80.9.0-r0) (81/86) Installing py3-setuptools-pyc (80.9.0-r0) (82/86) Installing py3-setuptools_scm (8.3.1-r0) (83/86) Installing py3-setuptools_scm-pyc (8.3.1-r0) (84/86) Installing py3-wheel (0.46.1-r0) (85/86) Installing py3-wheel-pyc (0.46.1-r0) (86/86) Installing .makedepends-py3-complexheatmap (20251012.154705) Executing busybox-1.37.0-r19.trigger OK: 584 MiB in 175 packages >>> py3-complexheatmap: Cleaning up srcdir >>> py3-complexheatmap: Cleaning up pkgdir >>> py3-complexheatmap: Cleaning up tmpdir >>> py3-complexheatmap: Fetching py3-complexheatmap-1.7.6.tar.gz::https://files.pythonhosted.org/packages/source/p/pycomplexheatmap/pycomplexheatmap-1.7.6.tar.gz >>> py3-complexheatmap: Fetching py3-complexheatmap-1.7.6.tar.gz::https://files.pythonhosted.org/packages/source/p/pycomplexheatmap/pycomplexheatmap-1.7.6.tar.gz >>> py3-complexheatmap: Checking sha512sums... py3-complexheatmap-1.7.6.tar.gz: OK >>> py3-complexheatmap: Unpacking /var/cache/distfiles/py3-complexheatmap-1.7.6.tar.gz... 2025-10-12 15:47:08,850 gpep517 INFO Building wheel via backend setuptools.build_meta /usr/lib/python3.12/site-packages/setuptools_scm/_integration/setuptools.py:92: UserWarning: version of PyComplexHeatmap already set warnings.warn(f"version of {dist_name} already set") /usr/lib/python3.12/site-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsWarning: `install_requires` overwritten in `pyproject.toml` (dependencies) corresp(dist, value, root_dir) /usr/lib/python3.12/site-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated !! ******************************************************************************** Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). By 2026-Feb-18, you need to update your project and remove deprecated calls or your builds will no longer be supported. See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. ******************************************************************************** !! corresp(dist, value, root_dir) /usr/lib/python3.12/site-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated. !! ******************************************************************************** Please consider removing the following classifiers in favor of a SPDX license expression: License :: OSI Approved :: MIT License See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. ******************************************************************************** !! dist._finalize_license_expression() /usr/lib/python3.12/site-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. !! ******************************************************************************** Please consider removing the following classifiers in favor of a SPDX license expression: License :: OSI Approved :: MIT License See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. ******************************************************************************** !! self._finalize_license_expression() 2025-10-12 15:47:08,884 root INFO running bdist_wheel 2025-10-12 15:47:08,892 root INFO running build 2025-10-12 15:47:08,892 root INFO running build_py 2025-10-12 15:47:08,894 root INFO creating build/lib/PyComplexHeatmap 2025-10-12 15:47:08,894 root INFO copying PyComplexHeatmap/colors.py -> build/lib/PyComplexHeatmap 2025-10-12 15:47:08,894 root INFO copying PyComplexHeatmap/dotHeatmap.py -> build/lib/PyComplexHeatmap 2025-10-12 15:47:08,895 root INFO copying PyComplexHeatmap/oncoPrint.py -> build/lib/PyComplexHeatmap 2025-10-12 15:47:08,895 root INFO copying PyComplexHeatmap/utils.py -> build/lib/PyComplexHeatmap 2025-10-12 15:47:08,895 root INFO copying PyComplexHeatmap/annotations.py -> build/lib/PyComplexHeatmap 2025-10-12 15:47:08,895 root INFO copying PyComplexHeatmap/clustermap.py -> build/lib/PyComplexHeatmap 2025-10-12 15:47:08,895 root INFO copying PyComplexHeatmap/_version.py -> build/lib/PyComplexHeatmap 2025-10-12 15:47:08,895 root INFO copying PyComplexHeatmap/__init__.py -> build/lib/PyComplexHeatmap 2025-10-12 15:47:08,895 root INFO running egg_info 2025-10-12 15:47:08,897 root INFO writing PyComplexHeatmap.egg-info/PKG-INFO 2025-10-12 15:47:08,897 root INFO writing dependency_links to PyComplexHeatmap.egg-info/dependency_links.txt 2025-10-12 15:47:08,897 root INFO writing requirements to PyComplexHeatmap.egg-info/requires.txt 2025-10-12 15:47:08,897 root INFO writing top-level names to PyComplexHeatmap.egg-info/top_level.txt ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any 2025-10-12 15:47:08,905 root INFO reading manifest file 'PyComplexHeatmap.egg-info/SOURCES.txt' 2025-10-12 15:47:08,906 root INFO reading manifest template 'MANIFEST.in' 2025-10-12 15:47:08,907 root WARNING warning: no files found matching '*.ipynb' under directory 'notebooks' 2025-10-12 15:47:08,907 root WARNING no previously-included directories found matching 'data' 2025-10-12 15:47:08,907 root WARNING no previously-included directories found matching 'docs' 2025-10-12 15:47:08,907 root WARNING no previously-included directories found matching 'notebooks' 2025-10-12 15:47:08,907 root WARNING no previously-included directories found matching 'comprison' 2025-10-12 15:47:08,907 root INFO adding license file 'LICENSE' 2025-10-12 15:47:08,908 root INFO writing manifest file 'PyComplexHeatmap.egg-info/SOURCES.txt' 2025-10-12 15:47:08,916 root INFO installing to build/bdist.linux-x86_64/wheel 2025-10-12 15:47:08,916 root INFO running install 2025-10-12 15:47:08,921 root INFO running install_lib 2025-10-12 15:47:08,923 root INFO creating build/bdist.linux-x86_64/wheel 2025-10-12 15:47:08,923 root INFO creating build/bdist.linux-x86_64/wheel/PyComplexHeatmap 2025-10-12 15:47:08,923 root INFO copying build/lib/PyComplexHeatmap/colors.py -> build/bdist.linux-x86_64/wheel/./PyComplexHeatmap 2025-10-12 15:47:08,923 root INFO copying build/lib/PyComplexHeatmap/dotHeatmap.py -> build/bdist.linux-x86_64/wheel/./PyComplexHeatmap 2025-10-12 15:47:08,923 root INFO copying build/lib/PyComplexHeatmap/oncoPrint.py -> build/bdist.linux-x86_64/wheel/./PyComplexHeatmap 2025-10-12 15:47:08,923 root INFO copying build/lib/PyComplexHeatmap/utils.py -> build/bdist.linux-x86_64/wheel/./PyComplexHeatmap 2025-10-12 15:47:08,923 root INFO copying build/lib/PyComplexHeatmap/annotations.py -> build/bdist.linux-x86_64/wheel/./PyComplexHeatmap 2025-10-12 15:47:08,923 root INFO copying build/lib/PyComplexHeatmap/clustermap.py -> build/bdist.linux-x86_64/wheel/./PyComplexHeatmap 2025-10-12 15:47:08,923 root INFO copying build/lib/PyComplexHeatmap/_version.py -> build/bdist.linux-x86_64/wheel/./PyComplexHeatmap 2025-10-12 15:47:08,923 root INFO copying build/lib/PyComplexHeatmap/__init__.py -> build/bdist.linux-x86_64/wheel/./PyComplexHeatmap 2025-10-12 15:47:08,923 root INFO running install_egg_info 2025-10-12 15:47:08,925 root INFO Copying PyComplexHeatmap.egg-info to build/bdist.linux-x86_64/wheel/./PyComplexHeatmap-1.7.6-py3.12.egg-info 2025-10-12 15:47:08,925 root INFO running install_scripts 2025-10-12 15:47:08,926 root INFO creating build/bdist.linux-x86_64/wheel/pycomplexheatmap-1.7.6.dist-info/WHEEL 2025-10-12 15:47:08,926 wheel INFO creating '/home/udu/aports/community/py3-complexheatmap/src/pycomplexheatmap-1.7.6/.dist/.tmp-jmdhv3th/pycomplexheatmap-1.7.6-py3-none-any.whl' and adding 'build/bdist.linux-x86_64/wheel' to it 2025-10-12 15:47:08,926 wheel INFO adding 'PyComplexHeatmap/__init__.py' 2025-10-12 15:47:08,926 wheel INFO adding 'PyComplexHeatmap/_version.py' 2025-10-12 15:47:08,926 wheel INFO adding 'PyComplexHeatmap/annotations.py' 2025-10-12 15:47:08,927 wheel INFO adding 'PyComplexHeatmap/clustermap.py' 2025-10-12 15:47:08,927 wheel INFO adding 'PyComplexHeatmap/colors.py' 2025-10-12 15:47:08,927 wheel INFO adding 'PyComplexHeatmap/dotHeatmap.py' 2025-10-12 15:47:08,927 wheel INFO adding 'PyComplexHeatmap/oncoPrint.py' 2025-10-12 15:47:08,927 wheel INFO adding 'PyComplexHeatmap/utils.py' 2025-10-12 15:47:08,927 wheel INFO adding 'pycomplexheatmap-1.7.6.dist-info/licenses/LICENSE' 2025-10-12 15:47:08,927 wheel INFO adding 'pycomplexheatmap-1.7.6.dist-info/METADATA' 2025-10-12 15:47:08,927 wheel INFO adding 'pycomplexheatmap-1.7.6.dist-info/WHEEL' 2025-10-12 15:47:08,927 wheel INFO adding 'pycomplexheatmap-1.7.6.dist-info/top_level.txt' 2025-10-12 15:47:08,927 wheel INFO adding 'pycomplexheatmap-1.7.6.dist-info/RECORD' 2025-10-12 15:47:08,927 root INFO removing build/bdist.linux-x86_64/wheel 2025-10-12 15:47:08,928 gpep517 INFO The backend produced .dist/pycomplexheatmap-1.7.6-py3-none-any.whl pycomplexheatmap-1.7.6-py3-none-any.whl Warning: Please install palettable to enable palettable colormaps >>> py3-complexheatmap: Entering fakeroot... >>> py3-complexheatmap-pyc*: Running split function pyc... 'usr/lib/python3.12/site-packages/PyComplexHeatmap/__pycache__' -> '/home/udu/aports/community/py3-complexheatmap/pkg/py3-complexheatmap-pyc/usr/lib/python3.12/site-packages/PyComplexHeatmap/__pycache__' >>> py3-complexheatmap-pyc*: Preparing subpackage py3-complexheatmap-pyc... >>> py3-complexheatmap-pyc*: Running postcheck for py3-complexheatmap-pyc >>> py3-complexheatmap*: Running postcheck for py3-complexheatmap >>> py3-complexheatmap*: Preparing package py3-complexheatmap... >>> py3-complexheatmap-pyc*: Tracing dependencies... python3 py3-matplotlib py3-numpy py3-pandas py3-seaborn python3~3.12 >>> py3-complexheatmap-pyc*: Package size: 305.7 KB >>> py3-complexheatmap-pyc*: Compressing data... >>> py3-complexheatmap-pyc*: Create checksum... >>> py3-complexheatmap-pyc*: Create py3-complexheatmap-pyc-1.7.6-r0.apk >>> py3-complexheatmap*: Tracing dependencies... python3 py3-matplotlib py3-numpy py3-pandas py3-seaborn python3~3.12 >>> py3-complexheatmap*: Package size: 232.8 KB >>> py3-complexheatmap*: Compressing data... >>> py3-complexheatmap*: Create checksum... >>> py3-complexheatmap*: Create py3-complexheatmap-1.7.6-r0.apk >>> py3-complexheatmap: Build complete at Sun, 12 Oct 2025 15:47:10 +0000 elapsed time 0h 0m 6s >>> py3-complexheatmap: Cleaning up srcdir >>> py3-complexheatmap: Cleaning up pkgdir >>> py3-complexheatmap: Uninstalling dependencies... (1/86) Purging .makedepends-py3-complexheatmap (20251012.154705) (2/86) Purging py3-seaborn-pyc (0.13.2-r2) (3/86) Purging py3-seaborn (0.13.2-r2) (4/86) Purging py3-matplotlib-pyc (3.9.3-r0) (5/86) Purging py3-matplotlib (3.9.3-r0) (6/86) Purging py3-contourpy-pyc (1.3.1-r0) (7/86) Purging py3-contourpy (1.3.1-r0) (8/86) Purging py3-cycler-pyc (0.12.1-r1) (9/86) Purging py3-cycler (0.12.1-r1) (10/86) Purging py3-fonttools-pyc (4.58.0-r0) (11/86) Purging py3-fonttools (4.58.0-r0) (12/86) Purging py3-kiwisolver-pyc (1.4.6-r0) (13/86) Purging py3-kiwisolver (1.4.6-r0) (14/86) Purging py3-matplotlib-data (3.9.3-r0) (15/86) Purging py3-matplotlib-fonts (3.9.3-r0) (16/86) Purging py3-pillow-pyc (11.2.1-r0) (17/86) Purging py3-pillow (11.2.1-r0) (18/86) Purging py3-statsmodels-pyc (0.14.4-r0) (19/86) Purging py3-statsmodels (0.14.4-r0) (20/86) Purging py3-pandas-pyc (2.2.3-r0) (21/86) Purging py3-pandas (2.2.3-r0) (22/86) Purging py3-dateutil-pyc (2.9.0-r1) (23/86) Purging py3-dateutil (2.9.0-r1) (24/86) Purging py3-tz-pyc (2025.2-r0) (25/86) Purging py3-tz (2025.2-r0) (26/86) Purging py3-tzdata-pyc (2025.2-r0) (27/86) Purging py3-tzdata (2025.2-r0) (28/86) Purging py3-attrs-pyc (25.3.0-r0) (29/86) Purging py3-attrs (25.3.0-r0) (30/86) Purging py3-patsy-pyc (1.0.1-r0) (31/86) Purging py3-patsy (1.0.1-r0) (32/86) Purging py3-six-pyc (1.17.0-r0) (33/86) Purging py3-six (1.17.0-r0) (34/86) Purging py3-scipy-pyc (1.13.1-r1) (35/86) Purging py3-scipy (1.13.1-r1) (36/86) Purging py3-pooch-pyc (1.8.2-r1) (37/86) Purging py3-pooch (1.8.2-r1) (38/86) Purging py3-platformdirs-pyc (4.3.8-r0) (39/86) Purging py3-platformdirs (4.3.8-r0) (40/86) Purging py3-requests-pyc (2.32.5-r0) (41/86) Purging py3-requests (2.32.5-r0) (42/86) Purging py3-certifi-pyc (2025.4.26-r0) (43/86) Purging py3-certifi (2025.4.26-r0) (44/86) Purging py3-charset-normalizer-pyc (3.4.2-r0) (45/86) Purging py3-charset-normalizer (3.4.2-r0) (46/86) Purging py3-idna-pyc (3.10-r0) (47/86) Purging py3-idna (3.10-r0) (48/86) Purging py3-urllib3-pyc (1.26.20-r0) (49/86) Purging py3-urllib3 (1.26.20-r0) (50/86) Purging py3-numpy-tests (2.2.4-r1) (51/86) Purging py3-numpy-pyc (2.2.4-r1) (52/86) Purging py3-numpy (2.2.4-r1) (53/86) Purging openblas (0.3.28-r0) (54/86) Purging py3-gpep517-pyc (19-r0) (55/86) Purging py3-gpep517 (19-r0) (56/86) Purging py3-installer-pyc (0.7.0-r2) (57/86) Purging py3-installer (0.7.0-r2) (58/86) Purging py3-setuptools_scm-pyc (8.3.1-r0) (59/86) Purging py3-setuptools_scm (8.3.1-r0) (60/86) Purging py3-setuptools-pyc (80.9.0-r0) (61/86) Purging py3-setuptools (80.9.0-r0) (62/86) Purging py3-wheel-pyc (0.46.1-r0) (63/86) Purging py3-wheel (0.46.1-r0) (64/86) Purging py3-packaging-pyc (25.0-r0) (65/86) Purging py3-packaging (25.0-r0) (66/86) Purging py3-parsing-pyc (3.2.3-r0) (67/86) Purging py3-parsing (3.2.3-r0) (68/86) Purging freetype (2.13.3-r0) (69/86) Purging lcms2 (2.16-r0) (70/86) Purging libgfortran (14.2.0-r6) (71/86) Purging libimagequant (4.2.2-r0) (72/86) Purging libpng (1.6.47-r0) (73/86) Purging libquadmath (14.2.0-r6) (74/86) Purging libwebpdemux (1.5.0-r0) (75/86) Purging libwebpmux (1.5.0-r0) (76/86) Purging libxcb (1.17.0-r0) (77/86) Purging libxdmcp (1.1.5-r1) (78/86) Purging openjpeg (2.5.3-r0) (79/86) Purging qhull (2020.2-r3) (80/86) Purging tiff (4.7.1-r0) (81/86) Purging libbsd (0.12.2-r0) (82/86) Purging libjpeg-turbo (3.1.0-r0) (83/86) Purging libmd (1.1.0-r0) (84/86) Purging libwebp (1.5.0-r0) (85/86) Purging libsharpyuv (1.5.0-r0) (86/86) Purging libxau (1.0.12-r0) Executing busybox-1.37.0-r19.trigger OK: 296 MiB in 89 packages >>> py3-complexheatmap: Updating the community/x86_64 repository index... >>> py3-complexheatmap: Signing the index...